1BEHA | PDB|?

Section I. Input Sequence

1
VDLSKWSGPL
11
SLQEVDEQPQ
21
HPLHVTYAGA
31
AVDELGKVLT
41
PTQVKNRPTS
51
ISWDGLDSGK
61
LYTLVLTDPD
71
APSRKDPKYR
81
EWHHFLVVNM
91
KGNDISSGTV
101
LSDYVGSGPP
111
KGTGLHRYVW
121
LVYEQDRPLK
131
CDEPILSNRS
141
GDHRGKFKVA
151
SFRKKYELRA
161
PVAGTCYQAE
171
WDDYVPKLYE
181
QLSG

 

Section II. Predicted Contact Map

[-] Click to view the predicted contact map of the input sequence
Status
Current status:
Complete
Submitted on:
2017-11-23 19:56:47
Scheduled on:
2017-11-23 20:08:04
Finished on:
2017-11-23 21:14:36
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indices: (0,0)prob:0.0000
Download Predicted Contact Map
the contact image.
To view the contact image.
the contact result file.
Open the result file using a text editor such as WordPad (Windows) or vi (Linux/Unix/MacOS).
Download Predicted 3D Models
predicted 3D models.
To open .zip files, you may use 7-zip for Windows or unzip for Linux/Unix/MacOS.
Download Detailed Prediction Results
detailed prediction results.
To open .zip files, you may use 7-zip for Windows or unzip for Linux/Unix/MacOS.

Section III. Predicted 3D models assisted by predicted contacts (see the result by clicking on it)

[+] Click to view the predicted 3D model(s) of the input sequence

Section IV. Multiple Sequence Alignment (See MSAViewer for help)

[+] Click to view the multiple sequence alignment (could be very slow)


Please cite the following method papers:
1. Sheng Wang, Siqi Sun and Jinbo Xu. Analysis of deep learning methods for blind protein contact prediction in CASP12. PROTEINS, 2017
2. Sheng Wang, Zhen Li, Yizhou Yu and Jinbo Xu. Folding Membrane Proteins by Deep Transfer Learning. Cell Systems, 2017
3. Sheng Wang, Siqi Sun, Zhen Li, Renyu Zhang and Jinbo Xu. Accurate De Novo Prediction of Protein Contact Map by Ultra-Deep Learning Model. PLoS Computational Biology, 2017.
4. Sheng Wang, Wei Li, Renyu Zhang, Shiwang Liu and Jinbo Xu. CoinFold: a web server for protein contact prediction and contact-assisted protein folding. Nucleic Acids Research, 2016.
5. Jianzhu Ma, Sheng Wang, Zhiyong Wang and Jinbo Xu. Protein Contact Prediction by Integrating Joint Evolutionary Coupling Analysis and Supervised Learning. RECOMB 2015, Lecture Notes in Computer Science, Volume 9029, 2015, pp 218-221. Also appears at Bioinformatics (2015).